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  • Top cofit genes for GFF3175 from Variovorax sp. SCN45

    Uncharacterized MFS-type transporter
    SEED: Permeases of the major facilitator superfamily

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5196 L-arabinose ABC transporter, permease protein AraH 0.24 0.56
    2 GFF5054 Homogentisate 1,2-dioxygenase (EC 1.13.11.5) no 0.56
    3 GFF6547 Glutathione S-transferase (EC 2.5.1.18) no 0.52
    4 GFF7010 no description no 0.52
    5 GFF445 Ferrichrome transport ATP-binding protein FhuC no 0.51
    6 GFF4888 Mlr6156 protein no 0.51
    7 GFF1583 Fumarate hydratase class I, beta region (EC 4.2.1.2); L(+)-tartrate dehydratase beta subunit (EC 4.2.1.32) no 0.50
    8 GFF7161 Transcriptional regulator, LysR family no 0.50
    9 GFF2618 no description no 0.50
    10 GFF2365 Altronate dehydratase (EC 4.2.1.7) no 0.50
    11 GFF2032 Excinuclease ABC subunit A, dimeric form no 0.49
    12 GFF7263 Malate dehydrogenase (EC 1.1.1.37) no 0.49
    13 GFF5081 Amidohydrolase family protein no 0.49
    14 GFF1013 hypothetical protein no 0.49
    15 GFF7242 hypothetical protein no 0.48
    16 GFF865 hypothetical protein no 0.48
    17 GFF6831 hypothetical protein no 0.47
    18 GFF2851 Phosphoglycerate mutase family protein 0.46 0.47
    19 GFF5198 ABC transporter, permease protein (cluster 2, ribose/xylose/arabinose/galactose) no 0.47
    20 GFF3423 Adenylate cyclase (EC 4.6.1.1) no 0.47

    Or look for negative cofitness