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  • Top cofit genes for PS417_16215 from Pseudomonas simiae WCS417

    ABC transporter substrate-binding protein
    SEED: Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3)
    KEGG: multiple sugar transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_05785 tail protein no 0.18
    2 PS417_25135 hypothetical protein no 0.17
    3 PS417_18625 hypothetical protein no 0.16
    4 PS417_01160 hypothetical protein no 0.16
    5 PS417_17445 sulfur oxidation protein SoxZ no 0.16
    6 PS417_24445 4-hydroxyphenylpyruvate dioxygenase 0.28 0.16
    7 PS417_10985 NADH:flavin oxidoreductase no 0.16
    8 PS417_17535 beta-lactamase no 0.15
    9 PS417_05775 tail tape measure protein no 0.15
    10 PS417_01970 pilus assembly protein no 0.15
    11 PS417_25320 dTDP-4-dehydrorhamnose reductase no 0.15
    12 PS417_10765 hypothetical protein no 0.15
    13 PS417_19920 AraC family transcriptional regulator no 0.15
    14 PS417_06625 hypothetical protein no 0.15
    15 PS417_19135 DeoR faimly transcriptional regulator no 0.15
    16 PS417_19255 short-chain dehydrogenase no 0.15
    17 PS417_13760 transcriptional regulator no 0.14
    18 PS417_27555 DNA-binding protein no 0.14
    19 PS417_11995 RNA polymerase sigma factor no 0.14
    20 PS417_22755 acriflavine resistance protein B 0.39 0.14

    Or look for negative cofitness