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  • Top cofit genes for GFF3166 from Variovorax sp. SCN45

    Transcriptional regulator, IclR family
    SEED: Transcriptional regulator, IclR family

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6341 no description no 0.73
    2 GFF6262 Transcriptional regulator PhnF no 0.64
    3 GFF2988 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) @ O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) no 0.62
    4 GFF2367 Transcriptional regulator, LysR family no 0.61
    5 GFF1592 Response regulator/GGDEF/EAL domain protein no 0.61
    6 GFF2000 Phosphomethylpyrimidine synthase ThiC (EC 4.1.99.17) 0.41 0.61
    7 GFF3525 Protein tyrosine/serine phosphatase no 0.60
    8 GFF4461 hypothetical protein no 0.59
    9 GFF4017 Arsenate reductase (EC 1.20.4.4) thioredoxin-coupled, LMWP family no 0.59
    10 GFF7080 no description no 0.58
    11 GFF1451 FIG00456379: hypothetical protein no 0.58
    12 GFF7416 DNA/RNA non-specific endonuclease no 0.56
    13 GFF6097 1,2-phenylacetyl-CoA epoxidase, subunit E (EC 1.14.13.149) no 0.56
    14 GFF3518 no description no 0.56
    15 GFF7043 Putative transmembrane protein no 0.54
    16 GFF2067 OmpA/MotB no 0.54
    17 GFF4996 no description no 0.54
    18 GFF7148 D-amino-acid oxidase (EC 1.4.3.3) no 0.53
    19 GFF1473 Amidase family protein BBta_1912 no 0.53
    20 GFF1865 Transcriptional regulator, AraC family no 0.53

    Or look for negative cofitness