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  • Top cofit genes for GFF3159 from Variovorax sp. SCN45

    Sulfite dehydrogenase (quinone), molybdopterin-containing subunit SoeA (EC 1.8.5.6)
    SEED: Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.5.3)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF836 Vitamin B12 ABC transporter, substrate-binding protein BtuF no 0.71
    2 GFF1932 no description no 0.68
    3 GFF7379 Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12) no 0.63
    4 GFF1792 Transcriptional regulator, IclR family no 0.62
    5 GFF6621 Mobile element protein no 0.62
    6 GFF374 Transcription elongation factor GreA no 0.62
    7 GFF2227 Tricarboxylate transport protein TctC no 0.62
    8 GFF412 Transcription-repair coupling factor 0.24 0.61
    9 GFF7291 Magnesium and cobalt transport protein CorA no 0.61
    10 GFF3219 hypothetical protein no 0.61
    11 GFF6070 Gamma-glutamyltranspeptidase (EC 2.3.2.2) @ Glutathione hydrolase (EC 3.4.19.13) no 0.60
    12 GFF2218 FIG00455441: hypothetical protein no 0.60
    13 GFF1018 23S rRNA (guanosine(2251)-2'-O)-methyltransferase (EC 2.1.1.185) no 0.60
    14 GFF6195 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) no 0.59
    15 GFF3800 Fumarylacetoacetate hydrolase family protein no 0.59
    16 GFF2737 Uncharacterized MFS-type transporter no 0.59
    17 GFF3738 Uncharacterized protein YraP no 0.59
    18 GFF116 RidA/YER057c/UK114 superfamily, group 1 no 0.59
    19 GFF3018 VgrG protein no 0.59
    20 GFF4429 Inner membrane protein YpjD no 0.58

    Or look for negative cofitness