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  • Top cofit genes for GFF3158 from Variovorax sp. SCN45

    Sulfite dehydrogenase (quinone), iron-sulfur subunit SoeB (EC 1.8.5.6)
    SEED: Anaerobic dimethyl sulfoxide reductase chain B (EC 1.8.5.3)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3139 NAD-dependent protein deacetylase of SIR2 family 0.31 0.54
    2 GFF3073 Fatty acid hydroxylase family (carotene hydroxylase/sterol desaturase) no 0.54
    3 GFF1639 Polyketide synthase modules and related proteins no 0.53
    4 GFF3781 Transcriptional regulator, AcrR family no 0.52
    5 GFF3400 Benzaldehyde dehydrogenase no 0.51
    6 GFF5096 similar to protocatechuate 4,5-dioxygenase beta chain no 0.49
    7 GFF3242 FIG00444883: hypothetical protein no 0.49
    8 GFF905 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) no 0.49
    9 GFF4579 putative oxidoreductase, nitronate monooxygenase family no 0.48
    10 GFF5738 Flagellar biosynthesis protein FliR no 0.48
    11 GFF205 Nitroreductase family protein no 0.47
    12 GFF1672 BUG/TctC family periplasmic protein no 0.47
    13 GFF2948 salicylate esterase no 0.47
    14 GFF1966 Apolipoprotein N-acyltransferase / Copper homeostasis protein CutE no 0.46
    15 GFF3573 Efflux ABC transporter, ATP-binding protein no 0.45
    16 GFF4092 Copper tolerance protein no 0.44
    17 GFF6586 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) 0.22 0.44
    18 GFF1893 FIG00466861: hypothetical protein no 0.44
    19 GFF5778 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) no 0.44
    20 GFF1482 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.44

    Or look for negative cofitness