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  • Top cofit genes for GFF3154 from Variovorax sp. SCN45

    no description

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6058 ABC transporter, permease protein 1 (cluster 1, maltose/g3p/polyamine/iron) no 0.64
    2 GFF4090 Glutamate/aspartate ABC transporter, permease protein GltK (TC 3.A.1.3.4) no 0.58
    3 GFF6138 TRAP dicarboxylate transporter, DctQ subunit, unknown substrate 6 no 0.58
    4 GFF5185 FIG00732904: hypothetical protein no 0.57
    5 GFF3995 hypothetical protein no 0.57
    6 GFF6819 hypothetical protein no 0.56
    7 GFF3456 Possible regulatory protein similar to urea ABC transporter, substrate binding protein no 0.56
    8 GFF6042 Fatty acid desaturase (EC 1.14.19.1); Delta-9 fatty acid desaturase (EC 1.14.19.1) no 0.56
    9 GFF5661 hypothetical protein no 0.55
    10 GFF5307 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.241) no 0.55
    11 GFF803 MutT/Nudix family protein no 0.55
    12 GFF4691 Cobalt/zinc/cadmium resistance protein CzcD no 0.54
    13 GFF5732 Methyl-accepting chemotaxis sensor/transducer protein no 0.54
    14 GFF1481 L-carnitine dehydratase/bile acid-inducible protein F no 0.54
    15 GFF2958 hypothetical protein no 0.54
    16 GFF4390 Membrane-fusion protein no 0.53
    17 GFF255 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) no 0.53
    18 GFF2201 hypothetical protein no 0.52
    19 GFF6876 Aminotransferase, DegT/DnrJ/EryC1/StrS family no 0.52
    20 GFF3889 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) no 0.52

    Or look for negative cofitness