Top cofit genes for GFF3153 from Variovorax sp. SCN45

Two-component transcriptional response regulator, LuxR family
SEED: probable two-component system response regulator

Rank Hit Name Description Conserved? Cofitness  
1 GFF5057 Peptidoglycan D,D-transpeptidase MrdA (EC 3.4.16.4) no 0.64
2 GFF2182 Inner membrane component of TAM transport system no 0.63
3 GFF5325 3-dehydroquinate synthase (EC 4.2.3.4) no 0.63
4 GFF3889 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) 0.49 0.63
5 GFF7085 BUG/TctC family periplasmic protein no 0.62
6 GFF183 Virulence protein no 0.62
7 GFF3945 Phosphate transport regulator (distant homolog of PhoU) no 0.61
8 GFF6638 no description no 0.61
9 GFF4517 Uncharacterized MFS-type transporter YtbD no 0.60
10 GFF2183 Outer membrane component of TAM transport system no 0.60
11 GFF5261 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) no 0.59
12 GFF7295 HPr kinase/phosphorylase no 0.59
13 GFF6042 Fatty acid desaturase (EC 1.14.19.1); Delta-9 fatty acid desaturase (EC 1.14.19.1) no 0.59
14 GFF6139 Serine/threonine kinase no 0.57
15 GFF5307 Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.241) no 0.57
16 GFF5487 Thymidine phosphorylase (EC 2.4.2.4) no 0.57
17 GFF255 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) no 0.57
18 GFF3923 Kynurenine formamidase, bacterial (EC 3.5.1.9) no 0.57
19 GFF5210 hypothetical protein no 0.56
20 GFF967 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) no 0.56

Or look for negative cofitness