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  • Top cofit genes for PS417_16125 from Pseudomonas simiae WCS417

    AraC family transcriptional regulator
    SEED: Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_02270 carbamoyltransferase no 0.22
    2 PS417_27425 exopolyphosphatase 0.16 0.22
    3 PS417_22620 pyruvate kinase no 0.21
    4 PS417_18185 5-carboxymethyl-2-hydroxymuconate isomerase no 0.21
    5 PS417_03970 1-phosphofructokinase no 0.20
    6 PS417_15790 hypothetical protein no 0.20
    7 PS417_02975 3-dehydroquinate dehydratase no 0.20
    8 PS417_04580 hypothetical protein no 0.20
    9 PS417_15765 molybdopterin biosynthesis protein B no 0.19
    10 PS417_26155 hypothetical protein 0.16 0.19
    11 PS417_07140 peptidase M48 no 0.19
    12 PS417_12210 ABC transporter substrate-binding protein no 0.19
    13 PS417_23620 epimerase no 0.19
    14 PS417_15865 hypothetical protein no 0.19
    15 PS417_05620 alkyl hydroperoxide reductase 0.24 0.19
    16 PS417_26360 MFS transporter no 0.19
    17 PS417_14175 ArsC family transcriptional regulator no 0.18
    18 PS417_00380 zinc ABC transporter ATP-binding protein 0.21 0.18
    19 PS417_08920 branched-chain amino acid ABC transporter substrate-binding protein no 0.18
    20 PS417_10665 hypothetical protein no 0.18

    Or look for negative cofitness