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  • Top cofit genes for GFF3149 from Variovorax sp. SCN45

    RND efflux system, inner membrane transporter
    SEED: Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF284 putative 2-pyrone-4,6-dicarboxylic acid hydrolase no 0.57
    2 GFF182 FIG00347566: hypothetical protein no 0.57
    3 GFF5098 2-oxo-hepta-3-ene-1,7-dioic acid hydratase (EC 4.2.-.-) no 0.55
    4 GFF6106 Dienelactone hydrolase family protein no 0.54
    5 GFF620 Transcriptional regulator, LysR family no 0.52
    6 GFF5145 hypothetical protein no 0.51
    7 GFF2195 FIG00732904: hypothetical protein no 0.50
    8 GFF5775 Glucoamylase (EC 3.2.1.3) 0.20 0.50
    9 GFF5261 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) no 0.50
    10 GFF6568 hypothetical protein no 0.50
    11 GFF693 BUG/TctC family periplasmic protein no 0.49
    12 GFF3945 Phosphate transport regulator (distant homolog of PhoU) no 0.49
    13 GFF967 Pyruvate dehydrogenase E1 component (EC 1.2.4.1) no 0.49
    14 GFF4485 FIG00715336: hypothetical protein no 0.49
    15 GFF5325 3-dehydroquinate synthase (EC 4.2.3.4) no 0.49
    16 GFF2379 Serine/threonine protein kinase no 0.48
    17 GFF795 5-methyltetrahydropteroyltriglutamate--homocystei ne methyltransferase (EC 2.1.1.14) 0.61 0.48
    18 GFF33 Type IV pilus biogenesis protein PilZ no 0.48
    19 GFF7313 hypothetical protein no 0.48
    20 GFF2508 Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-) no 0.48

    Or look for negative cofitness