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  • Top cofit genes for PS417_16085 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_10390 RNA polymerase subunit sigma24 no 0.28
    2 PS417_21785 ABC transporter permease 0.21 0.21
    3 PS417_25110 capsular biosynthesis protein no 0.20
    4 PS417_09205 membrane protein no 0.19
    5 PS417_23835 hypothetical protein 0.26 0.19
    6 PS417_12810 diguanylate cyclase no 0.19
    7 PS417_27645 membrane protein no 0.18
    8 PS417_19305 acireductone dioxygenase 0.17 0.18
    9 PS417_19415 allantoinase no 0.18
    10 PS417_16010 alkanesulfonate monooxygenase no 0.17
    11 PS417_14110 2-nitropropane dioxygenase no 0.17
    12 PS417_14425 alkylhydroperoxidase 0.37 0.17
    13 PS417_15770 pyridoxine 5'-phosphate oxidase no 0.17
    14 PS417_15220 alkane 1-monooxygenase no 0.17
    15 PS417_15975 glutamate carboxypeptidase 0.41 0.17
    16 PS417_12985 DNA-binding protein 0.18 0.16
    17 PS417_09195 glutathione S-transferase 0.29 0.16
    18 PS417_09645 TonB-dependent receptor 0.23 0.16
    19 PS417_22205 potassium transporter TrkH 0.38 0.16
    20 PS417_18730 ABC transporter permease 0.34 0.16

    Or look for negative cofitness