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Cofit
Protein
Homologs
Top cofit genes for GFF3138 from
Variovorax sp. SCN45
VgrG protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF6114
ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines)
no
0.52
2
GFF5766
Chemotaxis protein CheD
no
0.51
3
GFF7257
KEGG: LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
no
0.50
4
GFF1365
no description
no
0.49
5
GFF2850
hypothetical protein
no
0.48
6
GFF3241
hypothetical protein
no
0.48
7
GFF3723
Cytochrome c5
no
0.47
8
GFF2851
Phosphoglycerate mutase family protein
no
0.47
9
GFF7192
ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines)
no
0.47
10
GFF5310
Cytochrome c4
no
0.46
11
GFF4667
hypothetical protein
no
0.45
12
GFF1115
Putative transmembrane protein
no
0.45
13
GFF6544
D-Lactate dehydrogenase, cytochrome c-dependent (EC 1.1.2.4)
no
0.45
14
GFF796
Transcriptional activator MetR
no
0.45
15
GFF3838
Phosphoenolpyruvate carboxylase (EC 4.1.1.31)
no
0.45
16
GFF1969
ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate)
no
0.45
17
GFF4505
hypothetical protein
no
0.43
18
GFF2543
Uncharacterized membrane protein Bcep18194_A6058
no
0.43
19
GFF3494
hypothetical protein
no
0.43
20
GFF2999
Putative transmembrane protein
no
0.43
Or look for
negative cofitness