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  • Top cofit genes for GFF3131 from Variovorax sp. SCN45

    VgrG protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1671 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) no 0.63
    2 GFF6009 Acyl-CoA dehydrogenase STM0857 no 0.61
    3 GFF2065 Peptidase, M23/M37 family no 0.59
    4 GFF3053 Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54) no 0.58
    5 GFF1257 Organosulfonate utilization protein SsuF no 0.57
    6 GFF988 LSU rRNA pseudouridine(1911/1915/1917) synthase (EC 5.4.99.23) no 0.56
    7 GFF1812 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) no 0.55
    8 GFF6715 Transcriptional regulator of RpiR family in catabolic operon no 0.53
    9 GFF571 6,7-dimethyl-8-ribityllumazine synthase (EC 2.5.1.78) no 0.53
    10 GFF2228 glycerophosphoryl diester phosphodiesterase no 0.52
    11 GFF3960 3'-to-5' oligoribonuclease (orn) no 0.52
    12 GFF646 no description no 0.52
    13 GFF3419 ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) no 0.51
    14 GFF4060 hypothetical protein no 0.51
    15 GFF1962 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) no 0.50
    16 GFF605 Aldolase related to tricarballylate utilization no 0.50
    17 GFF6840 Putative transmembrane protein no 0.50
    18 GFF6904 Zinc-type alcohol dehydrogenase-like protein no 0.50
    19 GFF466 hypothetical protein no 0.50
    20 GFF5276 D-arabinitol 4-dehydrogenase (EC 1.1.1.11) no 0.49

    Or look for negative cofitness