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  • Top cofit genes for PS417_16020 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_22340 carbamate kinase no 0.18
    2 PS417_12015 phosphoglycerate mutase no 0.18
    3 PS417_02425 thiosulfate sulfurtransferase no 0.18
    4 PS417_28010 pyridine nucleotide-disulfide oxidoreductase no 0.17
    5 PS417_05925 spermidine/putrescine ABC transporter permease 0.11 0.17
    6 PS417_23595 D-aminoacylase no 0.16
    7 PS417_17140 LysR family transcriptional regulator 0.38 0.16
    8 PS417_12845 NAD(P)H dehydrogenase no 0.16
    9 PS417_00990 LysR family transcriptional regulator 0.40 0.16
    10 PS417_10100 hypothetical protein no 0.16
    11 PS417_11075 hydroxypyruvate isomerase no 0.16
    12 PS417_22095 class V aminotransferase 0.37 0.16
    13 PS417_14475 2-hydroxyacid dehydrogenase no 0.16
    14 PS417_11660 acylamide amidohydrolase no 0.16
    15 PS417_03145 acetyl-CoA acetyltransferase no 0.15
    16 PS417_02825 amino acid ABC transporter permease no 0.15
    17 PS417_10865 GNAT family acetyltransferase no 0.15
    18 PS417_18370 hypothetical protein no 0.15
    19 PS417_26845 coniferyl aldehyde dehydrogenase no 0.15
    20 PS417_23620 epimerase no 0.15

    Or look for negative cofitness