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Cofit
Protein
Homologs
Top cofit genes for GFF3130 from
Variovorax sp. SCN45
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF5501
Glyoxalase family protein
no
0.54
2
GFF266
RND efflux system, inner membrane transporter
no
0.54
3
GFF794
KEGG: RNA polymerase sigma-70 factor, ECF subfamily
no
0.53
4
GFF5914
hypothetical protein
no
0.51
5
GFF2701
CaiB/BaiF family protein
no
0.51
6
GFF1309
Phosphoglucomutase (EC 5.4.2.2)
no
0.51
7
GFF7120
Ortho-halobenzoate 1,2-dioxygenase alpha-ISP protein OhbB
no
0.49
8
GFF6284
Cytochrome b561
no
0.49
9
GFF73
Probable haloacid dehalogenase
no
0.48
10
GFF4959
ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate)
no
0.47
11
GFF815
COGs COG3777
no
0.47
12
GFF1037
putative membrane protein
no
0.46
13
GFF5855
T1SS secreted agglutinin RTX
no
0.46
14
GFF1903
Acyl-homoserine lactone acylase PvdQ (EC 3.5.1.-), quorum-quenching
no
0.46
15
GFF2492
BUG/TctC family periplasmic protein
no
0.46
16
GFF791
RNA polymerase sigma factor RpoE
no
0.45
17
GFF6391
RfbJ protein
no
0.45
18
GFF6654
Transcriptional regulator, RpiR family
no
0.45
19
GFF1055
Fumarylacetoacetate hydrolase family protein
no
0.45
20
GFF5655
Formate dehydrogenase formation protein FdhE
no
0.45
Or look for
negative cofitness