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  • Top cofit genes for GFF3128 from Variovorax sp. SCN45

    T6SS PAAR-repeat protein / RhaS protein
    SEED: Rhs-family protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5053 Uncharacterized protein SPO0681 no 0.64
    2 GFF7024 Histone acetyltransferase HPA2 and related acetyltransferases no 0.60
    3 GFF467 Oxidoreductase, short-chain dehydrogenase/reductase family no 0.55
    4 GFF298 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase (EC 2.1.1.177) no 0.55
    5 GFF504 SAM-dependent methyltransferases no 0.54
    6 GFF1948 Phage integrase no 0.54
    7 GFF1473 Amidase family protein BBta_1912 no 0.53
    8 GFF5169 hypothetical protein no 0.53
    9 GFF6720 no description no 0.52
    10 GFF3217 hypothetical protein no 0.51
    11 GFF862 hypothetical protein no 0.51
    12 GFF7046 FIG00854755: hypothetical protein no 0.51
    13 GFF1946 Cardiolipin synthase (EC 2.7.8.-) phosphatidylethanolamine-utilizing, bacterial type ClsC no 0.51
    14 GFF907 Transcriptional regulator, LysR family no 0.51
    15 GFF4730 hypothetical protein no 0.51
    16 GFF2212 KEGG: prepilin peptidase CpaA no 0.51
    17 GFF4894 FIG00715096: hypothetical protein no 0.50
    18 GFF5376 hypothetical protein no 0.50
    19 GFF652 bacteriophytochrome heme oxygenase BphO no 0.50
    20 GFF2559 hypothetical protein no 0.50

    Or look for negative cofitness