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Gene
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Cofit
Protein
Homologs
Top cofit genes for GFF3128 from
Variovorax sp. SCN45
T6SS PAAR-repeat protein / RhaS protein
SEED: Rhs-family protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF5053
Uncharacterized protein SPO0681
no
0.64
2
GFF7024
Histone acetyltransferase HPA2 and related acetyltransferases
no
0.60
3
GFF467
Oxidoreductase, short-chain dehydrogenase/reductase family
no
0.55
4
GFF298
23S rRNA (pseudouridine(1915)-N(3))-methyltransferase (EC 2.1.1.177)
no
0.55
5
GFF504
SAM-dependent methyltransferases
no
0.54
6
GFF1948
Phage integrase
no
0.54
7
GFF1473
Amidase family protein BBta_1912
no
0.53
8
GFF5169
hypothetical protein
no
0.53
9
GFF6720
no description
no
0.52
10
GFF3217
hypothetical protein
no
0.51
11
GFF862
hypothetical protein
no
0.51
12
GFF7046
FIG00854755: hypothetical protein
no
0.51
13
GFF1946
Cardiolipin synthase (EC 2.7.8.-) phosphatidylethanolamine-utilizing, bacterial type ClsC
no
0.51
14
GFF907
Transcriptional regulator, LysR family
no
0.51
15
GFF4730
hypothetical protein
no
0.51
16
GFF2212
KEGG: prepilin peptidase CpaA
no
0.51
17
GFF4894
FIG00715096: hypothetical protein
no
0.50
18
GFF5376
hypothetical protein
no
0.50
19
GFF652
bacteriophytochrome heme oxygenase BphO
no
0.50
20
GFF2559
hypothetical protein
no
0.50
Or look for
negative cofitness