Top cofit genes for GFF3122 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Transcriptional regulator, AraC family

Rank Hit Name Description Conserved? Cofitness  
1 GFF1156 IncF plasmid conjugative transfer pilus assembly protein TraL no 0.57
2 GFF2343 Acetylornithine deacetylase (EC 3.5.1.16) 0.54 0.55
3 GFF2891 Thioredoxin no 0.55
4 GFF1459 hypothetical protein no 0.54
5 GFF3774 Endonuclease IV (EC 3.1.21.2) no 0.54
6 GFF2617 S-(hydroxymethyl)glutathione dehydrogenase (EC 1.1.1.284) no 0.54
7 GFF3131 TRAP-type C4-dicarboxylate transport system, small permease component no 0.54
8 GFF1803 Exoenzymes regulatory protein AepA precursor no 0.53
9 GFF3773 PTS system, fructose-specific IIB component (EC 2.7.1.69) / PTS system, fructose-specific IIC component (EC 2.7.1.69) 0.25 0.52
10 GFF4461 Polymyxin resistance protein ArnC, glycosyl transferase (EC 2.4.-.-) no 0.52
11 GFF423 Aldehyde dehydrogenase B (EC 1.2.1.22) no 0.51
12 GFF3056 COG1872 no 0.51
13 GFF4700 Glucitol operon activator protein no 0.50
14 GFF4545 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) 0.47 0.50
15 GFF986 Putative membrane protein no 0.48
16 GFF3384 PTS system, glucose-specific IIB component (EC 2.7.1.69) / PTS system, glucose-specific IIC component (EC 2.7.1.69) 0.45 0.48
17 GFF4786 UbiD family decarboxylase, MJ1133 type no 0.48
18 GFF4069 FIG074102: hypothetical protein no 0.47
19 GFF1268 Putative antirestriction protein no 0.47
20 GFF1332 FIG01045951: hypothetical protein no 0.47

Or look for negative cofitness