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Cofit
Protein
Homologs
Top cofit genes for GFF3120 from
Sphingobium sp. HT1-2
RecA protein
SEED: RecA protein
KEGG: recombination protein RecA
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF4057
Monofunctional biosynthetic peptidoglycan transglycosylase
0.31
0.82
2
GFF1180
Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
no
0.80
3
GFF4958
hypothetical protein
no
0.80
4
GFF4234
hypothetical protein
no
0.78
5
GFF747
DNA recombination protein RmuC
0.58
0.77
6
GFF4671
hypothetical protein
no
0.77
7
GFF3604
ATP-dependent DNA helicase RecG (EC 3.6.4.12)
0.98
0.77
8
GFF4326
hypothetical protein
no
0.76
9
GFF5084
Short-chain dehydrogenases of various substrate specificities
no
0.76
10
GFF251
Site-specific tyrosine recombinase XerC
0.85
0.76
11
GFF4235
hypothetical protein
no
0.76
12
GFF180
SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase (EC 2.1.1.182)
0.59
0.75
13
GFF975
Iron-sulfur cluster regulator IscR
no
0.75
14
GFF631
hypothetical protein
no
0.75
15
GFF4491
Putative type II restriction enzyme NmeDIP (EC 3.1.21.4) (Endonuclease NmeDIP) (R.NmeDIP)
no
0.75
16
GFF2688
hypothetical protein
no
0.75
17
GFF4017
Adenine-specific methyltransferase (EC 2.1.1.72)
no
0.74
18
GFF2471
Polyphosphate kinase (EC 2.7.4.1)
0.68
0.74
19
GFF1139
Efflux ABC transporter, permease/ATP-binding protein
no
0.74
20
GFF4557
hypothetical protein
no
0.74
Or look for
negative cofitness