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  • Top cofit genes for GFF312 from Variovorax sp. SCN45

    FIG021862: membrane protein, exporter
    SEED: FIG021862: membrane protein, exporter

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3758 NAD-specific glutamate dehydrogenase (EC 1.4.1.2); NADP-specific glutamate dehydrogenase (EC 1.4.1.4) no 0.74
    2 GFF7051 hypothetical protein no 0.71
    3 GFF5856 Outer membrane receptor proteins, likely involved in siderophore uptake no 0.69
    4 GFF375 hypothetical protein 0.45 0.69
    5 GFF2504 Cell division protein ZapD 0.26 0.67
    6 GFF1210 D-aminopeptidase dipeptide-binding protein DppA (EC 3.4.11.-) 0.27 0.67
    7 GFF6294 Cell division protein no 0.66
    8 GFF4396 Mobile element protein no 0.65
    9 GFF6392 hypothetical protein no 0.64
    10 GFF557 Plectin 1 no 0.64
    11 GFF489 ATP-dependent Clp protease proteolytic subunit ClpP (EC 3.4.21.92) no 0.63
    12 GFF4393 Uncharacterized ABC1 family protein XCC_1720 no 0.63
    13 GFF1119 Ribonuclease HI (EC 3.1.26.4) no 0.62
    14 GFF239 DNA polymerase III chi subunit (EC 2.7.7.7) no 0.62
    15 GFF6219 hypothetical protein no 0.61
    16 GFF2836 MotA/TolQ/ExbB proton channel family protein no 0.61
    17 GFF7323 Transcriptional response regulatory protein GlrR 0.52 0.60
    18 GFF6333 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) no 0.60
    19 GFF2835 putative TonB-dependent receptor no 0.60
    20 GFF6049 Acyl-CoA dehydrogenase family protein no 0.59

    Or look for negative cofitness