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  • Top cofit genes for PS417_15955 from Pseudomonas simiae WCS417

    secretion protein HylD
    SEED: RND efflux membrane fusion protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_26950 LysR family transcriptional regulator no 0.22
    2 PS417_22965 DNA mismatch repair protein MutT no 0.20
    3 PS417_22805 hypothetical protein no 0.20
    4 PS417_19595 3-methylcrotonyl-CoA carboxylase no 0.19
    5 PS417_04945 fimbrial chaperone protein no 0.18
    6 PS417_24680 murein transglycosylase no 0.17
    7 PS417_02525 iron ABC transporter permease 0.45 0.17
    8 PS417_24480 palmitoyl-CoA hydrolase 0.29 0.17
    9 PS417_08340 type IV secretion protein Rhs no 0.17
    10 PS417_23365 aminotransferase no 0.17
    11 PS417_25070 hypothetical protein no 0.17
    12 PS417_26130 membrane protein no 0.16
    13 PS417_19270 hypothetical protein no 0.16
    14 PS417_14325 AraC family transcriptional regulator no 0.16
    15 PS417_26835 3-mercaptopyruvate sulfurtransferase 0.75 0.16
    16 PS417_06870 TonB-dependent receptor no 0.16
    17 PS417_27350 calcium transporter ChaC no 0.16
    18 PS417_11945 hypothetical protein no 0.16
    19 PS417_20175 LysR family transcriptional regulator no 0.16
    20 PS417_19635 lipid kinase no 0.16

    Or look for negative cofitness