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  • Top cofit genes for GFF3113 from Variovorax sp. SCN45

    Methionine ABC transporter permease protein
    SEED: Methionine ABC transporter permease protein
    KEGG: D-methionine transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1273 no description no 0.53
    2 GFF5652 FIG00014764: hypothetical protein no 0.53
    3 GFF3522 no description no 0.53
    4 GFF849 putative carboxylesterase 0.28 0.52
    5 GFF1653 Transcriptional regulator, AcrR family no 0.52
    6 GFF1240 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.52
    7 GFF691 hypothetical protein no 0.52
    8 GFF7170 D-malate dehydrogenase [decarboxylating] (EC 1.1.1.83) no 0.50
    9 GFF6653 Aminotransferase, class III 0.17 0.49
    10 GFF820 Intracellular protease no 0.49
    11 GFF1368 BUG/TctC family periplasmic protein no 0.47
    12 GFF5965 hypothetical protein no 0.47
    13 GFF7029 hypothetical protein no 0.46
    14 GFF5220 putative secreted oxidoreductase no 0.46
    15 GFF6560 no description no 0.46
    16 GFF2717 Epimerase KguE no 0.46
    17 GFF4489 23S rRNA (cytosine(1962)-C(5))-methyltransferase (EC 2.1.1.191) 0.42 0.45
    18 GFF6330 BUG/TctC family periplasmic protein no 0.45
    19 GFF1459 Glutathione S-transferase (EC 2.5.1.18) no 0.45
    20 GFF2712 no description no 0.44

    Or look for negative cofitness