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  • Top cofit genes for GFF3113 from Sphingobium sp. HT1-2

    Transcription elongation factor GreB
    SEED: Transcription elongation factor GreB
    KEGG: transcription elongation factor GreB

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF914 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.78
    2 GFF3137 hypothetical protein no 0.76
    3 GFF1242 Magnesium and cobalt transport protein CorA 0.47 0.76
    4 GFF1470 Cell cycle transcriptional regulator CtrA no 0.76
    5 GFF4888 TonB-dependent receptor no 0.75
    6 GFF3590 DNA internalization-related competence protein ComEC/Rec2 no 0.75
    7 GFF3554 hypothetical protein no 0.73
    8 GFF3355 FIG00003370: Multicopper polyphenol oxidase no 0.73
    9 GFF3689 TonB-dependent receptor no 0.72
    10 GFF1133 hypothetical protein no 0.72
    11 GFF1019 L-rhamnose-1-dehydrogenase ( EC 1.1.1.173) no 0.72
    12 GFF1319 hypothetical protein no 0.72
    13 GFF4944 hypothetical protein no 0.72
    14 GFF1179 hypothetical protein no 0.72
    15 GFF1196 1-pyrroline-4-hydroxy-2-carboxylate deaminase (EC 3.5.4.22) 0.22 0.71
    16 GFF2626 YrbA protein 0.52 0.71
    17 GFF4818 Uncharacterized UPF0118 membrane protein no 0.71
    18 GFF3495 hypothetical protein no 0.71
    19 GFF691 Arylsulfatase (EC 3.1.6.1) no 0.70
    20 GFF3958 hypothetical protein no 0.70

    Or look for negative cofitness