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  • Top cofit genes for GFF3112 from Variovorax sp. SCN45

    Methionine ABC transporter substrate-binding protein
    SEED: Methionine ABC transporter substrate-binding protein
    KEGG: D-methionine transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1671 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) no 0.58
    2 GFF6479 hypothetical protein no 0.57
    3 GFF6650 no description no 0.56
    4 GFF3017 T6SS AAA+ chaperone ClpV (TssH) no 0.55
    5 GFF1377 Phosphohydrolase (MutT/nudix family protein) no 0.53
    6 GFF4508 no description no 0.53
    7 GFF2443 Iron-sulfur cluster regulator IscR no 0.53
    8 GFF2822 Periplasmic hemin-binding protein no 0.53
    9 GFF627 Secretion protein HlyD no 0.52
    10 GFF6320 Putative glutamine amidotransferase YafJ no 0.50
    11 GFF6410 Histidine utilization repressor no 0.50
    12 GFF4977 Transcriptional regulator for ferulate or vanillate catabolism no 0.50
    13 GFF3018 VgrG protein no 0.50
    14 GFF4504 FIG00953527: hypothetical protein no 0.50
    15 GFF2846 Putative Zn-dependent oxidoreductase PA5234 no 0.50
    16 GFF647 Two-component system response regulator QseB no 0.50
    17 GFF6084 Aerotolerance protein BatA no 0.50
    18 GFF6087 Transcriptional regulator, AcrR family no 0.49
    19 GFF2136 Ribokinase (EC 2.7.1.15) no 0.49
    20 GFF4362 BUG/TctC family periplasmic protein no 0.49

    Or look for negative cofitness