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  • Top cofit genes for GFF3104 from Sphingobium sp. HT1-2

    Error-prone repair homolog of DNA polymerase III alpha subunit (EC 2.7.7.7)
    SEED: DNA polymerase III alpha subunit (EC 2.7.7.7)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3474 hypothetical protein no 0.90
    2 GFF2451 ATPase no 0.89
    3 GFF3500 Sulfatase modifying factor 1 precursor (C-alpha-formyglycine- generating enzyme 1) no 0.89
    4 GFF376 hypothetical protein no 0.89
    5 GFF1842 hypothetical protein no 0.88
    6 GFF1663 Uncharacterized MFS-type transporter no 0.87
    7 GFF4959 UPF0301 protein YqgE no 0.87
    8 GFF4086 TonB-dependent receptor no 0.87
    9 GFF3134 hypothetical protein no 0.87
    10 GFF4579 CzcABC family efflux RND transporter, outer membrane protein no 0.87
    11 GFF3513 General secretion pathway protein J no 0.86
    12 GFF4791 Domain often clustered or fused with uracil-DNA glycosylase / Uracil-DNA glycosylase, putative family 6 (EC 3.2.2.27) no 0.85
    13 GFF5052 Pirin no 0.85
    14 GFF1696 Excinuclease ABC subunit A no 0.85
    15 GFF1130 hypothetical protein no 0.85
    16 GFF1128 hypothetical protein no 0.85
    17 GFF683 Fumarate hydratase class I, aerobic (EC 4.2.1.2) no 0.84
    18 GFF98 NAD(P)H-hydrate epimerase (EC 5.1.99.6) / ADP-dependent (S)-NAD(P)H-hydrate dehydratase (EC 4.2.1.136) no 0.84
    19 GFF4128 Membrane alanine aminopeptidase N (EC 3.4.11.2) no 0.84
    20 GFF20 hypothetical protein no 0.84

    Or look for negative cofitness