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  • Top cofit genes for GFF3100 from Variovorax sp. SCN45

    Aspartyl protease
    SEED: Transporter
    KEGG: aspartyl protease family protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1671 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) no 0.64
    2 GFF1126 Metal transporter, ZIP family no 0.61
    3 GFF3232 Phage lysozyme R (EC 3.2.1.17) no 0.58
    4 GFF3159 Sulfite dehydrogenase (quinone), molybdopterin-containing subunit SoeA (EC 1.8.5.6) no 0.57
    5 GFF5631 DNA-binding domain of ModE no 0.56
    6 GFF4579 putative oxidoreductase, nitronate monooxygenase family no 0.55
    7 GFF3219 hypothetical protein no 0.54
    8 GFF157 Methyltransferase type 12 no 0.54
    9 GFF4719 hypothetical protein no 0.53
    10 GFF2737 Uncharacterized MFS-type transporter no 0.53
    11 GFF1418 Transcriptional regulator, LysR family no 0.53
    12 GFF860 Cocaine esterase (EC 3.1.1.-) no 0.53
    13 GFF324 Uracil phosphoribosyltransferase (EC 2.4.2.9) no 0.52
    14 GFF2970 BUG/TctC family periplasmic protein no 0.50
    15 GFF2650 hypothetical protein no 0.50
    16 GFF836 Vitamin B12 ABC transporter, substrate-binding protein BtuF no 0.50
    17 GFF6351 T6SS associated component TagF (ImpM) no 0.49
    18 GFF6708 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) no 0.49
    19 GFF647 Two-component system response regulator QseB no 0.49
    20 GFF6089 1,2-epoxyphenylacetyl-CoA isomerase (EC 5.3.3.18) no 0.49

    Or look for negative cofitness