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  • Top cofit genes for PS417_15840 from Pseudomonas simiae WCS417

    histidine kinase
    SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_04375 ABC transporter ATP-binding protein no 0.25
    2 PS417_11790 ABC transporter substrate-binding protein no 0.21
    3 PS417_10625 membrane protein no 0.21
    4 PS417_09575 glutathione S-transferase no 0.20
    5 PS417_15105 membrane protein no 0.20
    6 PS417_17080 lipoprotein no 0.20
    7 PS417_05815 recombinase RecA no 0.19
    8 PS417_06245 zinc metallopeptidase RseP no 0.19
    9 PS417_24460 hypothetical protein no 0.19
    10 PS417_23025 murein transglycosylase no 0.19
    11 PS417_28405 hypothetical protein no 0.19
    12 PS417_14875 polyisoprenoid-binding protein no 0.19
    13 PS417_17945 hypothetical protein no 0.18
    14 PS417_20845 hypothetical protein no 0.18
    15 PS417_26085 peptidase no 0.18
    16 PS417_27800 exodeoxyribonuclease III no 0.18
    17 PS417_23290 hypothetical protein no 0.18
    18 PS417_15165 1-carboxy-3-chloro-3,4-dihydroxycyclo hexa-1,5-diene dehydrogenase no 0.18
    19 PS417_17105 spore coat protein no 0.18
    20 PS417_13965 acetoin utilization protein no 0.18

    Or look for negative cofitness