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  • Top cofit genes for GFF3090 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

    Putative xylanase
    SEED: Putative xylanase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1529 PTS system, galactose-inducible IIB component (EC 2.7.1.69) / PTS system, galactose-inducible IIC component (EC 2.7.1.69) no 0.49
    2 GFF1337 FIG01045819: hypothetical protein no 0.48
    3 GFF467 type 1 fimbriae anchoring protein FimD 0.28 0.47
    4 GFF1437 T1SS secreted agglutinin RTX no 0.47
    5 GFF562 Puative phophotriesterase no 0.47
    6 GFF2856 corresponds to STY1986 from Accession AL513382: Salmonella typhi CT18 no 0.46
    7 GFF4090 Periplasmic fimbrial chaperone protein no 0.45
    8 GFF2523 Ni,Fe-hydrogenase I cytochrome b subunit no 0.45
    9 GFF2526 hypothetical protein no 0.44
    10 GFF3928 Propionate kinase, propanediol utilization (EC 2.7.2.1) 0.38 0.42
    11 GFF3750 Putative inner membrane protein no 0.41
    12 GFF2299 Autoinducer 2 (AI-2) aldolase LsrF (EC 4.2.1.-) no 0.41
    13 GFF435 3-dehydro-L-gulonate 2-dehydrogenase (EC 1.1.1.130) no 0.41
    14 GFF1854 Molybdopterin binding motif, CinA N-terminal domain / C-terminal domain of CinA type E no 0.40
    15 GFF4428 Allantoinase (EC 3.5.2.5) no 0.40
    16 GFF339 YqeJ protein no 0.40
    17 GFF2452 Lysine decarboxylase, inducible (EC 4.1.1.18) no 0.40
    18 GFF197 Probable secreted protein no 0.40
    19 GFF2838 Cold shock protein CspC no 0.40
    20 GFF433 Putative chemotaxis protein, resembles cheA no 0.39

    Or look for negative cofitness