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  • Top cofit genes for GFF309 from Variovorax sp. SCN45

    3-hydroxydecanoyl-[ACP] dehydratase (EC 4.2.1.59)
    SEED: 3-hydroxydecanoyl-[ACP] dehydratase (EC 4.2.1.60)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3964 2-hydroxymuconic semialdehyde hydrolase (EC 3.7.1.9) no 0.45
    2 GFF3125 no description no 0.43
    3 GFF3307 FIG01161751: hypothetical protein no 0.43
    4 GFF5011 Geranyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.5) no 0.42
    5 GFF3995 hypothetical protein no 0.42
    6 GFF5595 no description no 0.42
    7 GFF4597 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) no 0.41
    8 GFF2820 ABC-type hemin transport system, ATPase component no 0.41
    9 GFF3945 Phosphate transport regulator (distant homolog of PhoU) no 0.40
    10 GFF3489 Transcriptional regulator, AcrR family no 0.40
    11 GFF4400 hypothetical protein no 0.40
    12 GFF693 BUG/TctC family periplasmic protein no 0.40
    13 GFF7340 ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) no 0.39
    14 GFF5870 hypothetical protein no 0.39
    15 GFF6574 Conjugative transfer protein TrbL no 0.38
    16 GFF5709 no description no 0.38
    17 GFF3788 putative secreted protein no 0.38
    18 GFF2161 Dihydroorotase (EC 3.5.2.3) no 0.38
    19 GFF183 Virulence protein no 0.38
    20 GFF1199 Uncharacterized protein similar to glutamate-1-semialdehyde aminotransferase 0.52 0.38

    Or look for negative cofitness