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Cofit
Protein
Homologs
Top cofit genes for GFF3085 from
Variovorax sp. SCN45
no description
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF4337
Electron transfer flavoprotein, alpha subunit
no
0.73
2
GFF3409
Probable lipoprotein signal peptide
no
0.67
3
GFF42
hypothetical protein
no
0.66
4
GFF1470
Putative transposase InsK for insertion sequence element IS150
no
0.64
5
GFF6475
hypothetical protein
no
0.62
6
GFF7025
hypothetical protein
no
0.61
7
GFF1690
KEGG: DNA-binding protein H-NS
no
0.60
8
GFF5620
ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate)
no
0.60
9
GFF4788
Uncharacterized protein COG3236
no
0.59
10
GFF2823
Hemin transport protein HmuS
no
0.59
11
GFF4608
3-hydroxyacyl-CoA dehydrogenase [fadN-fadA-fadE operon] (EC 1.1.1.35) / Enoyl-CoA hydratase [fadN-fadA-fadE operon] (EC 4.2.1.17)
no
0.57
12
GFF7163
FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8)
no
0.57
13
GFF2687
Protein containing domains DUF404, DUF407, DUF403
no
0.56
14
GFF866
no description
no
0.56
15
GFF6865
Transcriptional regulator, Crp/Fnr family
no
0.56
16
GFF5708
Pyridoxal phosphate-dependent aminotransferase
no
0.55
17
GFF7012
Taurine ABC transporter, ATP-binding protein TauB
no
0.55
18
GFF6078
no description
no
0.55
19
GFF3597
TRAP-type C4-dicarboxylate transport system, small permease component
no
0.54
20
GFF6045
FIG00932121: hypothetical protein
no
0.54
Or look for
negative cofitness