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  • Top cofit genes for GFF3084 from Variovorax sp. SCN45

    no description

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF6008 Citrate synthase (si) (EC 2.3.3.1) no 0.50
    2 GFF4268 Uncharacterized MFS-type transporter no 0.48
    3 GFF1791 Hydroxymethylpyrimidine ABC transporter, substrate-binding component no 0.47
    4 GFF4191 BUG/TctC family periplasmic protein no 0.44
    5 GFF4248 Similar to eukaryotic Peptidyl prolyl 4-hydroxylase, alpha subunit (EC 1.14.11.2) no 0.43
    6 GFF176 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) no 0.43
    7 GFF7242 hypothetical protein no 0.42
    8 GFF5982 Transcriptional regulator, AcrR family no 0.41
    9 GFF2926 FIG00349048: hypothetical protein no 0.41
    10 GFF3903 Similar to citrate lyase beta chain, 10 no 0.40
    11 GFF2891 ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) no 0.40
    12 GFF815 COGs COG3777 no 0.40
    13 GFF4218 no description no 0.40
    14 GFF6615 putative plasmid stabilization protein no 0.40
    15 GFF3218 Phage tail fiber no 0.40
    16 GFF3455 Two component response regulator associated with urea and amide use no 0.40
    17 GFF6202 Unknown substrate:proton symporter no 0.40
    18 GFF7385 hypothetical protein no 0.39
    19 GFF1463 Spermidine/putrescine import ABC transporter ATP-binding protein PotA (TC 3.A.1.11.1) no 0.39
    20 GFF7356 Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) no 0.38

    Or look for negative cofitness