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  • Top cofit genes for GFF3080 from Variovorax sp. SCN45

    no description

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3844 Transcriptional regulator, LysR family no 0.52
    2 GFF1641 Polyketide synthase modules and related proteins no 0.51
    3 GFF4529 Probable signal peptide protein no 0.51
    4 GFF3093 FIG138056: a glutathione-dependent thiol reductase no 0.50
    5 GFF3455 Two component response regulator associated with urea and amide use no 0.50
    6 GFF1928 Fumarylacetoacetate hydrolase family protein no 0.48
    7 GFF6052 HNH endonuclease family protein no 0.48
    8 GFF2388 hypothetical protein no 0.46
    9 GFF7304 Limit dextrin alpha-1,6-maltotetraose-hydrolase (EC 3.2.1.196) no 0.46
    10 GFF1440 Multidomain signal transduction protein including CheB-like methylesterase, CheR-like methyltransferase and BaeS-like histidine kinase no 0.44
    11 GFF285 no description no 0.44
    12 GFF7278 Transposase no 0.44
    13 GFF4180 hypothetical protein no 0.43
    14 GFF5957 Uncharacterized MFS-type transporter no 0.43
    15 GFF5774 RNA polymerase sigma factor for flagellar operon no 0.43
    16 GFF3988 Transcriptional regulator, MarR family no 0.43
    17 GFF6254 Phosphonate ABC transporter ATP-binding protein PhnC (TC 3.A.1.9.1) no 0.43
    18 GFF6069 Permease of the drug/metabolite transporter (DMT) superfamily no 0.42
    19 GFF4017 Arsenate reductase (EC 1.20.4.4) thioredoxin-coupled, LMWP family no 0.42
    20 GFF6333 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) no 0.41

    Or look for negative cofitness