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  • Top cofit genes for GFF3079 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

    Putative response regulator
    SEED: Putative response regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3602 Type III secretion cytoplasmic protein (YscL) no 0.41
    2 GFF344 FIG01046146: hypothetical protein no 0.40
    3 GFF206 L-carnitine/gamma-butyrobetaine antiporter no 0.39
    4 GFF4061 putative periplasmic protein no 0.36
    5 GFF1960 Protease VII (Omptin) precursor (EC 3.4.23.49) no 0.36
    6 GFF1470 Phosphoethanolamine transferase EptA specific for the 1 phosphate group of core-lipid A no 0.36
    7 GFF2867 hypothetical protein no 0.36
    8 GFF4232 Putative fimbrial chaperone no 0.36
    9 GFF1979 FIG00638309: hypothetical protein no 0.35
    10 GFF4851 hypothetical protein no 0.35
    11 GFF1307 Prepilin peptidase dependent protein A precursor no 0.34
    12 GFF3943 Propanediol dehydratase small subunit (EC 4.2.1.28) no 0.34
    13 GFF1159 IncF plasmid conjugative transfer pilus assembly protein TraB no 0.34
    14 GFF69 Uncharacterized protein YadU in stf fimbrial cluster no 0.34
    15 GFF1593 Multidrug resistance protein B no 0.33
    16 GFF348 Xyloside transporter XynT no 0.33
    17 GFF4052 Protein of avirulence locus ImpE no 0.33
    18 GFF4186 IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) no 0.33
    19 GFF1084 Molybdopterin biosynthesis molybdochelatase MogA no 0.32
    20 GFF992 hypothetical protein no 0.32

    Or look for negative cofitness