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  • Top cofit genes for GFF3078 from Variovorax sp. SCN45

    SAM-dependent methyltransferase
    SEED: Methyltransferase (EC 2.1.1.-)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3366 Septum site-determining protein MinD no 0.64
    2 GFF6324 Kup system potassium uptake protein no 0.63
    3 GFF2047 Polyhydroxyalkanoic acid synthase no 0.57
    4 GFF6328 LPS-assembly lipoprotein LptE no 0.56
    5 GFF6251 hypothetical protein no 0.55
    6 GFF4972 Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) no 0.54
    7 GFF4878 putative lipoprotein no 0.54
    8 GFF344 no description no 0.53
    9 GFF5080 DNA recombination-dependent growth factor RdgC no 0.53
    10 GFF5701 FKBP-type peptidyl-prolyl cis-trans isomerase SlpA (EC 5.2.1.8) no 0.53
    11 GFF2074 hypothetical protein no 0.51
    12 GFF6033 Branched-chain amino acid ABC transporter, permease protein LivH (TC 3.A.1.4.1) no 0.51
    13 GFF151 FIG00460174: hypothetical protein no 0.51
    14 GFF232 Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18) no 0.50
    15 GFF4178 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) no 0.50
    16 GFF2905 surface antigen gene no 0.50
    17 GFF6884 FIG00932717: hypothetical protein no 0.50
    18 GFF5274 Various polyols ABC transporter, permease protein 2 no 0.50
    19 GFF1694 Na+/H+-dicarboxylate symporter no 0.50
    20 GFF237 ABC-type branched-chain amino acid transport systems, periplasmic component no 0.49

    Or look for negative cofitness