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  • Top cofit genes for PS417_15740 from Pseudomonas simiae WCS417

    hypothetical protein
    SEED: Nitrate/nitrite response regulator protein

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_15720 nitrate reductase 0.88 0.29
    2 PS417_20250 copper resistance protein CopC no 0.22
    3 PS417_07445 peptidase S9 0.48 0.22
    4 PS417_02435 flagellar motor protein MotA 0.38 0.22
    5 PS417_03065 peptidase A24 0.40 0.22
    6 PS417_28300 N-acetylmuramoyl-L-alanine amidase 0.40 0.21
    7 PS417_08505 membrane protein no 0.21
    8 PS417_24085 protein RnfH 0.32 0.21
    9 PS417_23635 membrane protein 0.43 0.20
    10 PS417_23645 amino acid permease no 0.20
    11 PS417_08450 5'-nucleotidase 0.19 0.20
    12 PS417_15735 histidine kinase 0.82 0.20
    13 PS417_03910 pilus assembly protein no 0.20
    14 PS417_03110 pilus assembly protein CpaB no 0.20
    15 PS417_27265 iron ABC transporter substrate-binding protein no 0.20
    16 PS417_15715 nitrate reductase 0.87 0.19
    17 PS417_22610 pilus assembly protein PilZ no 0.19
    18 PS417_11900 conjugal transfer protein TraR no 0.19
    19 PS417_15265 type VI secretion protein VasK no 0.19
    20 PS417_26020 transcriptional initiation protein Tat 0.47 0.19

    Or look for negative cofitness