• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for GFF3076 from Variovorax sp. SCN45

    SSU rRNA pseudouridine(516) synthase (EC 5.4.99.19)
    SEED: Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70)
    KEGG: ribosomal small subunit pseudouridine synthase A

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2543 Uncharacterized membrane protein Bcep18194_A6058 no 0.70
    2 GFF2617 no description no 0.63
    3 GFF1190 Glycine oxidase ThiO (EC 1.4.3.19) no 0.63
    4 GFF1797 FIG022199: FAD-binding protein 0.35 0.63
    5 GFF3251 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase (EC 2.1.1.182) 0.92 0.62
    6 GFF4640 hypothetical protein no 0.61
    7 GFF2101 no description no 0.61
    8 GFF6704 no description no 0.60
    9 GFF6870 FIG00904791: hypothetical protein no 0.60
    10 GFF6382 ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) no 0.60
    11 GFF6872 FIG00904907: hypothetical protein no 0.59
    12 GFF6871 FIG00905613: hypothetical protein no 0.59
    13 GFF7129 Mobile element protein no 0.59
    14 GFF273 Transcriptional regulator, Xre family 0.46 0.59
    15 GFF475 Acetyl-CoA synthetase (EC 6.2.1.1) no 0.59
    16 GFF929 Transcriptional regulator, IclR family no 0.58
    17 GFF3854 FIG01269488: protein, clustered with ribosomal protein L32p no 0.58
    18 GFF1332 no description no 0.58
    19 GFF6621 Mobile element protein no 0.58
    20 GFF1792 Transcriptional regulator, IclR family no 0.57

    Or look for negative cofitness