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  • Top cofit genes for GFF3075 from Variovorax sp. SCN45

    Surface antigen
    SEED: Surface antigen

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF4632 Glycosyl transferase, family 2 no 0.59
    2 GFF5007 probable membrane protein STY4873 no 0.59
    3 GFF5926 FIG00957260: hypothetical protein no 0.58
    4 GFF924 hypothetical protein no 0.57
    5 GFF4814 Conserved hypothetical protein potentially related to ribose or hydroxymethylpyrimidine metabolism no 0.56
    6 GFF1126 Metal transporter, ZIP family no 0.56
    7 GFF424 Cobalamin synthase (EC 2.7.8.26) no 0.55
    8 GFF7266 L-threo-3-hydroxyaspartate ammonia-lyase (EC 4.3.1.16) no 0.55
    9 GFF4085 Transcriptional regulator, LysR family no 0.55
    10 GFF3263 Potassium voltage-gated channel subfamily KQT; possible potassium channel, VIC family no 0.54
    11 GFF1474 Transcriptional regulator, LysR family no 0.54
    12 GFF1788 hypothetical protein no 0.54
    13 GFF157 Methyltransferase type 12 no 0.53
    14 GFF1332 no description no 0.53
    15 GFF4187 hypothetical protein no 0.52
    16 GFF6195 ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) no 0.52
    17 GFF6198 D-malate dehydrogenase [decarboxylating] (EC 1.1.1.83) no 0.52
    18 GFF6085 Transcriptional regulator, AcrR family no 0.52
    19 GFF2905 surface antigen gene no 0.52
    20 GFF1750 BUG/TctC family periplasmic protein no 0.52

    Or look for negative cofitness