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  • Top cofit genes for GFF3074 from Variovorax sp. SCN45

    Putative polysaccharide deacetylase
    SEED: putative polysaccharide deacetylase

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF592 Glutamyl-Q tRNA(Asp) synthetase no 0.62
    2 GFF5986 hypothetical protein no 0.59
    3 GFF6217 hypothetical protein no 0.58
    4 GFF429 RND efflux system, inner membrane transporter no 0.55
    5 GFF6613 no description no 0.53
    6 GFF6819 hypothetical protein no 0.52
    7 GFF4612 Short-chain dehydrogenase/reductase SDR no 0.52
    8 GFF623 Demethylmenaquinone methyltransferase-like protein no 0.51
    9 GFF1634 Ferrichrome-iron receptor no 0.51
    10 GFF6681 TonB-dependent siderophore receptor no 0.51
    11 GFF1481 L-carnitine dehydratase/bile acid-inducible protein F no 0.50
    12 GFF4546 Permease of the drug/metabolite transporter (DMT) superfamily no 0.50
    13 GFF5647 ABC transporter, ATP-binding protein (cluster 12, methionine/phosphonates) no 0.50
    14 GFF6757 no description no 0.49
    15 GFF5502 Transcriptional regulator, LysR family no 0.49
    16 GFF6533 Methylphosphotriester-DNA--protein-cysteine S-methyltransferase (EC 2.1.1.n11) / DNA-3-methyladenine glycosylase II (EC 3.2.2.21) no 0.49
    17 GFF1926 ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) no 0.49
    18 GFF2900 Subtilisin-like serine proteases no 0.49
    19 GFF4013 hypothetical protein no 0.49
    20 GFF1920 Cysteine dioxygenase (EC 1.13.11.20) no 0.49

    Or look for negative cofitness