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  • Top cofit genes for GFF3074 from Sphingobium sp. HT1-2

    LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24)
    SEED: Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70)
    KEGG: ribosomal large subunit pseudouridine synthase C

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3517 General secretion pathway protein F no 0.88
    2 GFF4247 hypothetical protein no 0.86
    3 GFF4281 Ferredoxin reductase no 0.86
    4 GFF4354 hypothetical protein no 0.84
    5 GFF4970 Hexuronate transporter no 0.83
    6 GFF4669 Mobile element protein no 0.81
    7 GFF3606 Transcription-repair coupling factor no 0.81
    8 GFF696 hypothetical protein no 0.81
    9 GFF2704 Mobile element protein no 0.80
    10 GFF3914 Chloride channel protein no 0.80
    11 GFF4086 TonB-dependent receptor no 0.79
    12 GFF1130 hypothetical protein no 0.79
    13 GFF3621 hypothetical protein no 0.79
    14 GFF4448 hypothetical protein no 0.79
    15 GFF3513 General secretion pathway protein J no 0.79
    16 GFF3685 Zinc-regulated outer membrane receptor no 0.79
    17 GFF4298 IncF plasmid conjugative transfer protein TraG no 0.79
    18 GFF2824 alpha-L-fucosidase (EC 3.2.1.51) no 0.79
    19 GFF764 hypothetical protein no 0.79
    20 GFF2024 Rhamnogalacturonan endolyase (EC 4.2.2.23) no 0.79

    Or look for negative cofitness