• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for GFF3073 from Variovorax sp. SCN45

    Fatty acid hydroxylase family (carotene hydroxylase/sterol desaturase)
    SEED: Probable transmembrane protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF654 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) no 0.60
    2 GFF7167 Pirin no 0.60
    3 GFF5778 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) no 0.56
    4 GFF3158 Sulfite dehydrogenase (quinone), iron-sulfur subunit SoeB (EC 1.8.5.6) no 0.54
    5 GFF4579 putative oxidoreductase, nitronate monooxygenase family no 0.53
    6 GFF1672 BUG/TctC family periplasmic protein no 0.52
    7 GFF4915 hypothetical protein no 0.52
    8 GFF6714 Putative cryptic D-serine deaminase (EC 4.3.1.18) no 0.52
    9 GFF4512 no description no 0.51
    10 GFF5177 hypothetical protein no 0.50
    11 GFF1216 Isoaspartyl aminopeptidase (EC 3.4.19.5) @ Asp-X dipeptidase 0.28 0.50
    12 GFF3225 hypothetical protein no 0.49
    13 GFF3291 no description no 0.49
    14 GFF2717 Epimerase KguE no 0.49
    15 GFF1245 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase no 0.49
    16 GFF5248 Outer membrane porin protein 32 precursor no 0.49
    17 GFF3573 Efflux ABC transporter, ATP-binding protein no 0.48
    18 GFF7283 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) 0.82 0.48
    19 GFF1500 Transcriptional regulator, IclR family no 0.47
    20 GFF2647 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.47

    Or look for negative cofitness