Top cofit genes for GFF3072 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Putative inner membrane protein YqgA
SEED: Putative inner membrane protein YqgA

Rank	Hit	Name	Description	Conserved?	Cofitness
1	GFF4042		SAM-dependent methyltransferase YafE (UbiE paralog)	no	0.70
2	GFF1353		hypothetical protein	no	0.67
3	GFF1559		hypothetical protein	no	0.66
4	GFF775		putative excisionase	no	0.64
5	GFF1013		PTS system, mannose-specific IIB component (EC 2.7.1.69)	no	0.64
6	GFF869		Protein ytfJ precursor	no	0.64
7	GFF3749		Nucleoid-associated protein NdpA	no	0.63
8	GFF4152		Phage integrase, Phage P4-associated	no	0.63
9	GFF842		Putative uncharacterized protein YjfN	0.44	0.62
10	GFF2791		Hydrogenase maturation factor hoxO	no	0.62
11	GFF1463		Fe(2+)/alpha-ketoglutarate-dependent dioxygenase LpxO	no	0.61
12	GFF3703		Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4)	no	0.61
13	GFF3515		FIG00637864: hypothetical protein	no	0.60
14	GFF3087		FIG074102: hypothetical protein	no	0.60
15	GFF1033		Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-)	no	0.60
16	GFF1662		Chemotaxis response - phosphatase CheZ	0.55	0.59
17	GFF257		Putative carboxymethylenebutenolidase (EC 3.1.1.45)	no	0.58
18	GFF2755		UPF0225 protein YchJ	no	0.58
19	GFF2119		Transcription repressor of multidrug efflux pump acrAB operon, TetR (AcrR) family	no	0.58
20	GFF2914		putative cytoplasmic protein	no	0.58

Or look for negative cofitness