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  • Top cofit genes for GFF3066 from Sphingobium sp. HT1-2

    Deacetylases, including yeast histone deacetylase and acetoin utilization protein
    SEED: Histone deacetylase family protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5267 Transposase no 0.88
    2 GFF5253 hypothetical protein no 0.86
    3 GFF5046 hypothetical protein no 0.86
    4 GFF2556 Exodeoxyribonuclease III (EC 3.1.11.2) no 0.84
    5 GFF5052 Pirin 0.58 0.84
    6 GFF3683 Probable low-affinity inorganic phosphate transporter no 0.83
    7 GFF3505 ABC transporter, fused permease protein no 0.82
    8 GFF2392 Transcriptional regulator SJA_C1-23900, LysR family no 0.82
    9 GFF271 hypothetical protein no 0.82
    10 GFF4959 UPF0301 protein YqgE no 0.82
    11 GFF2819 hypothetical protein no 0.81
    12 GFF5251 Death on curing protein, Doc toxin no 0.81
    13 GFF5247 hypothetical protein no 0.81
    14 GFF1721 Xylan 1,4-beta-xylosidase (EC 3.2.1.37) no 0.81
    15 GFF3944 General stress protein no 0.81
    16 GFF1008 hypothetical protein no 0.80
    17 GFF832 Vitamin B12 ABC transporter, substrate-binding protein BtuF no 0.80
    18 GFF1213 N-formylglutamate deformylase (EC 3.5.1.68) 0.55 0.80
    19 GFF484 Predicted carboxypeptidase 0.23 0.80
    20 GFF2462 hypothetical protein no 0.80

    Or look for negative cofitness