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  • Top cofit genes for GFF3061 from Variovorax sp. SCN45

    BUG/TctC family periplasmic protein
    SEED: Tricarboxylate transport protein TctC

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF3117 Beta-phosphoglucomutase (EC 5.4.2.6) no 0.58
    2 GFF5266 Transaldolase (EC 2.2.1.2) no 0.56
    3 GFF6264 Ribose 1,5-bisphosphate phosphokinase PhnN (EC 2.7.4.23) no 0.55
    4 GFF2680 Protein of unknown function DUF1058 no 0.54
    5 GFF2623 Aspartate aminotransferase no 0.54
    6 GFF1224 Transcriptional regulator, LysR family no 0.53
    7 GFF725 TonB-dependent siderophore receptor no 0.52
    8 GFF1927 Alkanesulfonates-binding protein no 0.52
    9 GFF3754 Fumarylacetoacetate hydrolase family protein no 0.52
    10 GFF4347 High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) no 0.51
    11 GFF6 hypothetical protein no 0.51
    12 GFF907 Transcriptional regulator, LysR family no 0.51
    13 GFF4963 Transcriptional regulator, AraC family no 0.51
    14 GFF7179 Xaa-Pro aminopeptidase (EC 3.4.11.9) no 0.51
    15 GFF845 dTDP-glucose 4,6-dehydratase no 0.51
    16 GFF7046 FIG00854755: hypothetical protein no 0.50
    17 GFF5116 Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD no 0.50
    18 GFF2285 Transcriptional regulator, RpiR family no 0.50
    19 GFF1837 Transcriptional regulator, LysR family no 0.50
    20 GFF3002 Cobalt-containing nitrile hydratase subunit beta (EC 4.2.1.84) no 0.49

    Or look for negative cofitness