Top cofit genes for GFF3059 from Variovorax sp. SCN45

Transcriptional regulator, LysR family

Rank Hit Name Description Conserved? Cofitness  
1 GFF5301 ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) no 0.62
2 GFF1506 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) no 0.55
3 GFF669 BUG/TctC family periplasmic protein no 0.53
4 GFF1775 no description no 0.52
5 GFF6330 BUG/TctC family periplasmic protein no 0.52
6 GFF552 Peptidyl-prolyl cis-trans isomerase PpiA precursor (EC 5.2.1.8) no 0.51
7 GFF3304 Monofunctional biosynthetic peptidoglycan transglycosylase no 0.50
8 GFF4968 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit no 0.50
9 GFF5532 Putative oxidoreductase no 0.49
10 GFF3394 Benzoate ABC transporter, ATP-binding protein 1 no 0.49
11 GFF2680 Protein of unknown function DUF1058 no 0.49
12 GFF1762 no description no 0.48
13 GFF4109 Aspartate aminotransferase (EC 2.6.1.1) no 0.48
14 GFF2708 no description no 0.48
15 GFF6242 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD no 0.47
16 GFF6774 ABC transporter, substrate-binding protein (cluster 1, maltose/g3p/polyamine/iron) no 0.47
17 GFF7163 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD (EC 5.2.1.8) no 0.47
18 GFF1497 BUG/TctC family periplasmic protein no 0.47
19 GFF958 ElaB protein no 0.47
20 GFF534 Two-component system sensor histidine kinase no 0.46

Or look for negative cofitness