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  • Top cofit genes for GFF3058 from Variovorax sp. SCN45

    Demethylmenaquinone methyltransferase-like protein
    SEED: Dimethylmenaquinone methyltransferase family protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF7368 Enoyl-CoA hydratase (EC 4.2.1.17) no 0.63
    2 GFF1678 Transcriptional regulator, GntR family no 0.62
    3 GFF5127 no description no 0.62
    4 GFF3000 D-2-hydroxyglutarate dehydrogenase (EC 1.1.99.2) no 0.60
    5 GFF4313 2-dehydropantoate 2-reductase (EC 1.1.1.169) no 0.59
    6 GFF1437 Transcriptional regulator, LysR family no 0.58
    7 GFF3434 Organic hydroperoxide resistance protein no 0.56
    8 GFF5444 FIG005080: Possible exported protein no 0.54
    9 GFF6754 no description no 0.54
    10 GFF1329 Peptide-methionine (R)-S-oxide reductase MsrB (EC 1.8.4.12) no 0.53
    11 GFF3999 GMP reductase (EC 1.7.1.7) no 0.53
    12 GFF5669 hypothetical protein no 0.53
    13 GFF2450 Dihydropyrimidinase (EC 3.5.2.2) @ D-hydantoinase (EC 3.5.2.2) no 0.52
    14 GFF6066 Quinone oxidoreductase (EC 1.6.5.5) 0.48 0.52
    15 GFF1860 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) 0.41 0.52
    16 GFF3516 Potassium-transporting ATPase B chain (EC 3.6.3.12) (TC 3.A.3.7.1) no 0.52
    17 GFF3103 Cys-tRNA(Pro) deacylase YbaK no 0.52
    18 GFF6368 T6SS lysozyme-like component TssE no 0.51
    19 GFF4324 no description no 0.50
    20 GFF7254 Mannonate dehydratase (EC 4.2.1.8) no 0.50

    Or look for negative cofitness