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  • Top cofit genes for GFF3055 from Sphingobium sp. HT1-2

    Fumarate hydratase class II (EC 4.2.1.2)
    SEED: Fumarate hydratase class II (EC 4.2.1.2)
    KEGG: fumarate hydratase, class II

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF2504 Na(+)-dependent bicarbonate transporter BicA no 0.81
    2 GFF1847 hypothetical protein no 0.68
    3 GFF1119 hypothetical protein no 0.67
    4 GFF4481 hypothetical protein no 0.65
    5 GFF1188 Amidohydrolase no 0.65
    6 GFF2841 HlyD-like membrane fusion protein YhiI 0.18 0.65
    7 GFF2496 RND efflux system, membrane fusion protein no 0.65
    8 GFF4317 IncF plasmid conjugative transfer pilin protein TraA no 0.64
    9 GFF1748 Universal stress protein family no 0.64
    10 GFF3714 Flagellar basal-body rod protein FlgB 0.61 0.63
    11 GFF519 Acetate permease ActP (cation/acetate symporter) 0.39 0.63
    12 GFF1428 hypothetical protein no 0.63
    13 GFF1272 Molybdopterin synthase catalytic subunit MoaE (EC 2.8.1.12) 0.41 0.62
    14 GFF1370 Putative oxidoreductase YncB no 0.62
    15 GFF2294 Kynurenine formamidase, bacterial (EC 3.5.1.9) no 0.61
    16 GFF2759 Beta-lactamase class C-like and penicillin binding proteins (PBPs) superfamily no 0.61
    17 GFF3109 Oxidoreductase, GMC family no 0.60
    18 GFF4436 hypothetical protein no 0.60
    19 GFF3522 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins 0.22 0.60
    20 GFF2863 hypothetical protein no 0.60

    Or look for negative cofitness