Top cofit genes for GFF3050 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

UPF0301 protein YqgE
SEED: UPF0301 protein YqgE
KEGG: putative transcriptional regulator

Rank Hit Name Description Conserved? Cofitness  
1 GFF1690 RNA polymerase sigma factor for flagellar operon 0.59 0.59
2 GFF1059 ABC transporter, ATP-binding protein 0.40 0.56
3 GFF3357 Flagellar hook protein FlgE 0.65 0.54
4 GFF3354 Flagellar basal-body rod protein FlgB 0.24 0.54
5 GFF3052 Transcriptional regulator, IclR family no 0.54
6 GFF3360 Flagellar L-ring protein FlgH 0.69 0.53
7 GFF3363 Flagellar hook-associated protein FlgK 0.34 0.53
8 GFF4015 Flagellum-specific ATP synthase FliI 0.70 0.52
9 GFF1798 Arginine/ornithine antiporter ArcD no 0.51
10 GFF2341 UPF0141 membrane protein YijP possibly required for phosphoethanolamine modification of lipopolysaccharide no 0.51
11 GFF1520 LppC putative lipoprotein 0.32 0.51
12 GFF1714 Regulatory protein AsnC 0.47 0.50
13 GFF1228 Orf10 no 0.50
14 GFF4013 Flagellar hook-length control protein FliK no 0.49
15 GFF4006 Flagellar biosynthesis protein FliR 0.61 0.49
16 GFF1673 Flagellar transcriptional activator FlhD 0.34 0.49
17 GFF3358 Flagellar basal-body rod protein FlgF 0.67 0.49
18 GFF188 Survival protein SurA precursor (Peptidyl-prolyl cis-trans isomerase SurA) (EC 5.2.1.8) 0.71 0.49
19 GFF1945 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase no 0.49
20 GFF2410 Mlr7403 protein 0.45 0.49

Or look for negative cofitness