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  • Top cofit genes for GFF3048 from Variovorax sp. SCN45

    Glutamate/aspartate ABC transporter, permease protein GltJ (TC 3.A.1.3.4)
    SEED: Glutamate Aspartate transport system permease protein GltJ (TC 3.A.1.3.4)
    KEGG: putative glutamine transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF5288 Uncharacterized protein PA4513 no 0.57
    2 GFF4188 Signal peptidase I (EC 3.4.21.89) no 0.55
    3 GFF2676 Dialkylrecorsinol condensing enzyme no 0.53
    4 GFF2521 FIG00931781: hypothetical protein no 0.52
    5 GFF4563 Ferredoxin, 2Fe-2S no 0.51
    6 GFF3671 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) no 0.51
    7 GFF4195 BUG/TctC family periplasmic protein no 0.50
    8 GFF4888 Mlr6156 protein no 0.50
    9 GFF5341 Efflux ABC transporter, permease protein no 0.49
    10 GFF2437 hypothetical protein no 0.49
    11 GFF1004 Putative inner membrane protein YjeT (clustered with HflC) no 0.48
    12 GFF6324 Kup system potassium uptake protein 0.50 0.48
    13 GFF884 BUG/TctC family periplasmic protein no 0.48
    14 GFF6251 hypothetical protein no 0.48
    15 GFF5259 Na+/solute symporter no 0.48
    16 GFF1909 FIG00537389: hypothetical protein no 0.48
    17 GFF400 Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase (EC 2.8.4.4) 0.41 0.47
    18 GFF1862 Adenosine deaminase (EC 3.5.4.4) no 0.46
    19 GFF2702 FAD-dependent oxidoreductase no 0.46
    20 GFF5163 Soluble lytic murein transglycosylase (EC 4.2.2.n1) no 0.46

    Or look for negative cofitness