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  • Top cofit genes for PS417_15580 from Pseudomonas simiae WCS417

    DNA polymerase
    SEED: DNA polymerase III alpha subunit (EC 2.7.7.7)
    KEGG: error-prone DNA polymerase

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_12890 methyltransferase 0.27 0.25
    2 PS417_09575 glutathione S-transferase no 0.23
    3 PS417_15450 ABC transporter permease no 0.23
    4 PS417_08085 diguanylate cyclase no 0.22
    5 PS417_11995 RNA polymerase sigma factor no 0.22
    6 PS417_16235 ABC transporter ATP-binding protein no 0.22
    7 PS417_09605 glycosyl transferase no 0.21
    8 PS417_03035 SAM-dependent methyltransferase 0.24 0.21
    9 PS417_23155 pilus assembly protein PilW no 0.21
    10 PS417_07385 2-hydroxyacid dehydrogenase 0.27 0.20
    11 PS417_03675 hypothetical protein no 0.20
    12 PS417_07575 multifunctional fatty acid oxidation complex subunit alpha no 0.20
    13 PS417_26485 sodium:proton antiporter 0.51 0.20
    14 PS417_03670 MerR family transcriptional regulator no 0.20
    15 PS417_09510 transporter no 0.20
    16 PS417_17525 pyridine nucleotide-disulfide oxidoreductase no 0.20
    17 PS417_01015 polar amino acid ABC transporter permease no 0.20
    18 PS417_10720 chemotaxis protein CheY 0.41 0.20
    19 PS417_14485 malto-oligosyltrehalose trehalohydrolase 0.50 0.19
    20 PS417_18310 hypothetical protein 0.30 0.19

    Or look for negative cofitness