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  • Top cofit genes for GFF3044 from Hydrogenophaga sp. GW460-11-11-14-LB1

    Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)
    SEED: Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)

    Rank Hit Name Description Conserved? Cofitness  
    1 GFF1086 hypothetical protein no 0.37
    2 GFF3598 FIG00441227: hypothetical protein no 0.35
    3 GFF4926 Alpha/beta hydrolase fold no 0.34
    4 GFF4110 FIG00932595: hypothetical protein no 0.33
    5 GFF5460 putative transmembrane protein no 0.32
    6 GFF4564 Methionine aminopeptidase (EC 3.4.11.18) no 0.32
    7 GFF365 RNA polymerase sigma factor no 0.31
    8 GFF5338 Similar to phosphoglycolate phosphatase, clustered with ubiquinone biosynthesis SAM-dependent O-methyltransferase no 0.31
    9 GFF3007 Polysaccharide deacetylase no 0.31
    10 GFF5092 FIG00974664: hypothetical protein no 0.30
    11 GFF4520 ATP-dependent Clp protease adaptor protein ClpS no 0.30
    12 GFF4043 ATP-dependent Clp protease ATP-binding subunit ClpX no 0.30
    13 GFF3555 Fatty acid desaturase no 0.29
    14 GFF4041 hypothetical protein no 0.29
    15 GFF379 Arginase (EC 3.5.3.1) no 0.29
    16 GFF4451 Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) no 0.29
    17 GFF5382 domain of unknown function / Regulator of nucleoside diphosphate kinase no 0.29
    18 GFF1896 transcriptional regulator, MerR family no 0.29
    19 GFF3357 tRNA pseudouridine synthase A (EC 4.2.1.70) no 0.28
    20 GFF4226 Polyphosphate kinase (EC 2.7.4.1) no 0.28

    Or look for negative cofitness