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Cofit
Protein
Homologs
Top cofit genes for GFF3044 from
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
hypothetical protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
GFF2226
Hypothetical radical SAM family enzyme in interesting gene cluster
no
0.50
2
GFF3071
hypothetical protein
no
0.50
3
GFF1899
FIG00638298: membrane protein YfbV
no
0.47
4
GFF2106
L-aspartate oxidase (EC 1.4.3.16)
no
0.46
5
GFF2921
FIG004454: RNA binding protein
no
0.46
6
GFF704
Glutamate transport ATP-binding protein
no
0.43
7
GFF517
Oligopeptidase A (EC 3.4.24.70)
no
0.43
8
GFF1114
FIG01200701: possible membrane protein
no
0.43
9
GFF4534
C4-dicarboxylate transporter DcuC (TC 2.A.61.1.1)
no
0.42
10
GFF4731
Type III secretion injected virulence protein (YopP,YopJ, induces apoptosis, prevents cytokine induction, inhibits NFkb activation)
no
0.42
11
GFF2733
Membrane protein YciC, linked to IspA
no
0.42
12
GFF3916
Putrescine importer
no
0.41
13
GFF581
4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7)
no
0.41
14
GFF2028
Type III secretion and flagellar regulator RtsA
no
0.41
15
GFF2286
Melibiose carrier protein, Na+/melibiose symporter
no
0.40
16
GFF2316
Transcriptional (co)regulator CytR
no
0.40
17
GFF4524
Citrate Succinate antiporter (TC 2.A.47.3.2)
no
0.40
18
GFF1832
Two-component sensor protein RcsC (EC 2.7.3.-)
no
0.40
19
GFF1806
Fumarate hydratase class II (EC 4.2.1.2)
no
0.40
20
GFF925
hypothetical protein
no
0.40
Or look for
negative cofitness