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  • Top cofit genes for PS417_15570 from Pseudomonas simiae WCS417

    excinuclease ABC subunit A
    SEED: Excinuclease ABC subunit A paralog of unknown function
    KEGG: excinuclease ABC subunit A

    Rank Hit Name Description Conserved? Cofitness  
    1 PS417_21040 sulfurylase no 0.55
    2 PS417_06365 RNA polymerase sigma factor no 0.55
    3 PS417_21050 serine acetyltransferase no 0.54
    4 PS417_12610 RNA polymerase sigma factor no 0.52
    5 PS417_20955 secretion protein no 0.51
    6 PS417_13425 cupin no 0.51
    7 PS417_16070 TonB-dependent receptor no 0.49
    8 PS417_06970 LysR family transcriptional regulator no 0.47
    9 PS417_21045 cysteine synthase no 0.46
    10 PS417_17515 GfdT protein no 0.45
    11 PS417_16370 chemotaxis protein CheY no 0.44
    12 PS417_10720 chemotaxis protein CheY 0.62 0.44
    13 PS417_09900 hypothetical protein no 0.44
    14 PS417_05975 chemotaxis protein CheW no 0.43
    15 PS417_23950 polynucleotide phosphorylase/polyadenylase no 0.42
    16 PS417_03070 LuxR family transcriptional regulator no 0.42
    17 PS417_28265 pyridoxamine kinase 0.54 0.42
    18 PS417_12530 LysR family transcriptional regulator no 0.42
    19 PS417_12825 MFS transporter 0.35 0.41
    20 PS417_19145 membrane protein no 0.41

    Or look for negative cofitness